first off, don't start stressing too much just yet
get involved in a quality research project and work hard for your PI
work on honoring as many second year classes as you can
rock the boards - qbank by kaplan etc
be a work horse during your clinical rotations and honor them
you should be fine, try to repeat the class you failed over the summer or take a month off third year if needed, is it necessary to repeat the entire year? if you do repeat first year, make sure you take advantage of the time to work on research